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Browsing by Author Prajapati, Jigneshkumar Dahyabhai

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Issue DateTitleAuthor(s)
2015-01Atomistic modeling of two-dimensional electronic spectra and excited-state dynamics for a light harvesting 2 complexPrajapati, Jigneshkumar Dahyabhai
2022-05Atomistic simulation of molecules interacting with biological nanopores: from current understanding to future directionsPrajapati, Jigneshkumar Dahyabhai
2017-02Biophysical insight into the substrate permeation through the major outer membrane channels of acinetobacter baumanniiPrajapati, Jigneshkumar Dahyabhai
2025-02BPS2025 - MUON approach for ribosome simulations: Illustration of deacyl-tRNA release from E sitePrajapati, Jigneshkumar Dahyabhai
2022-04Changes in salt concentration modify the translocation of neutral molecules through a δcyma nanopore in a non-monotonic mannerPrajapati, Jigneshkumar Dahyabhai
2017-08Characterization of ciprofloxacin permeation pathways across the Porin OmpC using metadynamics and a string methodPrajapati, Jigneshkumar Dahyabhai
2020-06Computational modeling of ion transport in bulk and through a nanopore using the drude polarizable force fieldPrajapati, Jigneshkumar Dahyabhai
2022-12Conformational dynamics of loop L3 in OMPF: implications toward antibiotic translocation and voltage gatingPrajapati, Jigneshkumar Dahyabhai
2025Cryo-EM reveals remodeling of a tandem riboswitch at 2.9 Å resolutionPrajapati, Jigneshkumar Dahyabhai
2015-01Cyclodextrin interaction with specific channel CymA from K. OxytocaPrajapati, Jigneshkumar Dahyabhai
2020-09DFTB/MM molecular dynamics simulations of the FMO light-harvesting complexPrajapati, Jigneshkumar Dahyabhai
2020-08Dynamic interaction of fluoroquinolones with magnesium ions monitored using bacterial outer membrane nanoporesPrajapati, Jigneshkumar Dahyabhai
2020-05Dynamic interaction of norfloxacin to magnesium monitored by bacterial outer membrane nanoporesPrajapati, Jigneshkumar Dahyabhai
2017-02Effect of electroosmotic flow on the transport of α-cyclodextrin through the channel CymAPrajapati, Jigneshkumar Dahyabhai
2016-02Electro-osmotic driven kinetics of cyclodextrin through the cyma channelPrajapati, Jigneshkumar Dahyabhai
2018-01Enrofloxacin permeation pathways across the porin OmpCPrajapati, Jigneshkumar Dahyabhai
2018-11Environmental effects on the dynamics in the light-harvesting complexes LH2 and LH3 based on molecular simulationsPrajapati, Jigneshkumar Dahyabhai
2020-03Exploration of free energy surfaces across a membrane channel using metadynamics and umbrella samplingPrajapati, Jigneshkumar Dahyabhai
2022-09Exploring the energy landscape of riboswitches using collective variables based on tertiary contactsPrajapati, Jigneshkumar Dahyabhai
2021-03How to enter a bacterium: bacterial porins and the permeation of antibioticsPrajapati, Jigneshkumar Dahyabhai