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Integrated Analysis of Dysregulated miRNA-Gene Expression in HMGA2-Silenced Retinoblastoma Cells

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dc.contributor.author Deepa, P.R.
dc.date.accessioned 2021-09-17T04:45:21Z
dc.date.available 2021-09-17T04:45:21Z
dc.date.issued 2014
dc.identifier.uri https://journals.sagepub.com/doi/full/10.4137/BBI.S16958
dc.identifier.uri http://dspace.bits-pilani.ac.in:8080/xmlui/handle/123456789/2105
dc.description.abstract Retinoblastoma (RB) is a primary childhood eye cancer. HMGA2 shows promise as a molecule for targeted therapy. The involvement of miRNAs in genome-level molecular dys-regulation in HMGA2-silenced RB cells is poorly understood. Through miRNA expression microarray profiling, and an integrated array analysis of the HMGA2-silenced RB cells, the dysregulated miRNAs and the miRNA-target relationships were modelled. Loop network analysis revealed a regulatory association between the transcription factor (SOX5) and the deregulated miRNAs imiR-29a, miR-9*, miR-9-3). Silencing of HMGA2 deregulated the vital oncomirs (miR-7, miR-331, miR-26a, miR-221, miR-17∼92 and miR-106b∼25) in RB cells. From this list, the role of the miR-106b∼25 cluster was examined further for its expression in primary RB tumor tissues (n = 20). The regulatory targets of miR-106b∼25 cluster namely p21 (cyclin-dependent kinase inhibitor) and BIM (pro-apoptotic gene) were elevated, and apoptotic cell death was observed, in RB tumor cells treated with the specific antagomirs of the miR-106b∼25 cluster. Thus, suppression of miR-106b∼25 cluster controls RB tumor growth. Taken together, HMGA2 mediated anti-tumor effect present in RB is, in part, mediated through the miR-106b∼25 cluster en_US
dc.language.iso en en_US
dc.publisher Sage en_US
dc.subject Biology en_US
dc.subject Retinoblastoma en_US
dc.subject High mobility group proteins (HMG)A2 en_US
dc.subject miR-106b-25 cluster en_US
dc.subject Integrated inRNA-miRNA analysis en_US
dc.subject Antagomirs en_US
dc.title Integrated Analysis of Dysregulated miRNA-Gene Expression in HMGA2-Silenced Retinoblastoma Cells en_US
dc.type Article en_US


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